Databases, Protein
"Databases, Protein" is a descriptor in the National Library of Medicine's controlled vocabulary thesaurus,
MeSH (Medical Subject Headings). Descriptors are arranged in a hierarchical structure,
which enables searching at various levels of specificity.
Databases containing information about PROTEINS such as AMINO ACID SEQUENCE; PROTEIN CONFORMATION; and other properties.
Descriptor ID |
D030562
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MeSH Number(s) |
L01.313.500.750.300.188.400.300.750 L01.313.500.750.300.188.400.325.710 L01.470.750.750.300.750 L01.470.750.750.325.710
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Concept/Terms |
Protein Sequence Databases- Protein Sequence Databases
- Database, Protein Sequence
- Databases, Protein Sequence
- Protein Sequence Database
- Sequence Database, Protein
- Sequence Databases, Protein
- Databases, Amino Acid Sequence
- Amino Acid Sequence Databases
Protein Structure Databases- Protein Structure Databases
- Database, Protein Structure
- Databases, Protein Structure
- Protein Structure Database
- Structure Database, Protein
- Structure Databases, Protein
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Below are MeSH descriptors whose meaning is more general than "Databases, Protein".
- Information Science [L]
- Information Science [L01]
- Informatics [L01.313]
- Medical Informatics [L01.313.500]
- Medical Informatics Applications [L01.313.500.750]
- Information Systems [L01.313.500.750.300]
- Databases as Topic [L01.313.500.750.300.188]
- Databases, Factual [L01.313.500.750.300.188.400]
- Databases, Chemical [L01.313.500.750.300.188.400.300]
- Databases, Protein [L01.313.500.750.300.188.400.300.750]
- Databases, Genetic [L01.313.500.750.300.188.400.325]
- Databases, Protein [L01.313.500.750.300.188.400.325.710]
- Information Storage and Retrieval [L01.470]
- Databases as Topic [L01.470.750]
- Databases, Factual [L01.470.750.750]
- Databases, Chemical [L01.470.750.750.300]
- Databases, Protein [L01.470.750.750.300.750]
- Databases, Genetic [L01.470.750.750.325]
- Databases, Protein [L01.470.750.750.325.710]
Below are MeSH descriptors whose meaning is more specific than "Databases, Protein".
This graph shows the total number of publications written about "Databases, Protein" by people in this website by year, and whether "Databases, Protein" was a major or minor topic of these publications.
To see the data from this visualization as text, click here.
Year | Major Topic | Minor Topic | Total |
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2003 | 1 | 0 | 1 | 2005 | 1 | 2 | 3 | 2006 | 0 | 2 | 2 | 2007 | 0 | 1 | 1 | 2008 | 1 | 1 | 2 | 2009 | 0 | 1 | 1 | 2011 | 1 | 1 | 2 | 2012 | 0 | 3 | 3 | 2013 | 1 | 1 | 2 |
To return to the timeline, click here.
Below are the most recent publications written about "Databases, Protein" by people in Profiles.
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Nanjappa V, Thomas JK, Marimuthu A, Muthusamy B, Radhakrishnan A, Sharma R, Ahmad Khan A, Balakrishnan L, Sahasrabuddhe NA, Kumar S, Jhaveri BN, Sheth KV, Kumar Khatana R, Shaw PG, Srikanth SM, Mathur PP, Shankar S, Nagaraja D, Christopher R, Mathivanan S, Raju R, Sirdeshmukh R, Chatterjee A, Simpson RJ, Harsha HC, Pandey A, Prasad TS. Plasma Proteome Database as a resource for proteomics research: 2014 update. Nucleic Acids Res. 2014 Jan; 42(Database issue):D959-65.
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Copeland KL, Pellock SJ, Cox JR, Cafiero ML, Tschumper GS. Examination of tyrosine/adenine stacking interactions in protein complexes. J Phys Chem B. 2013 Nov 14; 117(45):14001-8.
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Fanayan S, Smith JT, Sethi MK, Cantor D, Goode R, Simpson RJ, Baker MS, Hancock WS, Nice E. Chromosome 7-centric analysis of proteomics data from a panel of human colon carcinoma cell lines. J Proteome Res. 2013 Jan 04; 12(1):89-96.
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Mathivanan S, Ji H, Tauro BJ, Chen YS, Simpson RJ. Identifying mutated proteins secreted by colon cancer cell lines using mass spectrometry. J Proteomics. 2012 Dec 05; 76 Spec No.:141-9.
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Tauro BJ, Greening DW, Mathias RA, Ji H, Mathivanan S, Scott AM, Simpson RJ. Comparison of ultracentrifugation, density gradient separation, and immunoaffinity capture methods for isolating human colon cancer cell line LIM1863-derived exosomes. Methods. 2012 Feb; 56(2):293-304.
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Kim Y, Bark S, Hook V, Bandeira N. NeuroPedia: neuropeptide database and spectral library. Bioinformatics. 2011 Oct 01; 27(19):2772-3.
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Mathias RA, Chen YS, Goode RJ, Kapp EA, Mathivanan S, Moritz RL, Zhu HJ, Simpson RJ. Tandem application of cationic colloidal silica and Triton X-114 for plasma membrane protein isolation and purification: towards developing an MDCK protein database. Proteomics. 2011 Apr; 11(7):1238-53.
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Greening DW, Simpson RJ. A centrifugal ultrafiltration strategy for isolating the low-molecular weight (
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Mathivanan S, Ahmed M, Ahn NG, Alexandre H, Amanchy R, Andrews PC, Bader JS, Balgley BM, Bantscheff M, Bennett KL, Björling E, Blagoev B, Bose R, Brahmachari SK, Burlingame AS, Bustelo XR, Cagney G, Cantin GT, Cardasis HL, Celis JE, Chaerkady R, Chu F, Cole PA, Costello CE, Cotter RJ, Crockett D, DeLany JP, De Marzo AM, DeSouza LV, Deutsch EW, Dransfield E, Drewes G, Droit A, Dunn MJ, Elenitoba-Johnson K, Ewing RM, Van Eyk J, Faca V, Falkner J, Fang X, Fenselau C, Figeys D, Gagné P, Gelfi C, Gevaert K, Gimble JM, Gnad F, Goel R, Gromov P, Hanash SM, Hancock WS, Harsha HC, Hart G, Hays F, He F, Hebbar P, Helsens K, Hermeking H, Hide W, Hjernø K, Hochstrasser DF, Hofmann O, Horn DM, Hruban RH, Ibarrola N, James P, Jensen ON, Jensen PH, Jung P, Kandasamy K, Kheterpal I, Kikuno RF, Korf U, Körner R, Kuster B, Kwon MS, Lee HJ, Lee YJ, Lefevre M, Lehvaslaiho M, Lescuyer P, Levander F, Lim MS, Löbke C, Loo JA, Mann M, Martens L, Martinez-Heredia J, McComb M, McRedmond J, Mehrle A, Menon R, Miller CA, Mischak H, Mohan SS, Mohmood R, Molina H, Moran MF, Morgan JD, Moritz R, Morzel M, Muddiman DC, Nalli A, Navarro JD, Neubert TA, Ohara O, Oliva R, Omenn GS, Oyama M, Paik YK, Pennington K, Pepperkok R, Periaswamy B, Petricoin EF, Poirier GG, Prasad TS, Purvine SO, Rahiman BA, Ramachandran P, Ramachandra YL, Rice RH, Rick J, Ronnholm RH, Salonen J, Sanchez JC, Sayd T, Seshi B, Shankari K, Sheng SJ, Shetty V, Shivakumar K, Simpson RJ, Sirdeshmukh R, Siu KW, Smith JC, Smith RD, States DJ, Sugano S, Sullivan M, Superti-Furga G, Takatalo M, Thongboonkerd V, Trinidad JC, Uhlen M, Vandekerckhove J, Vasilescu J, Veenstra TD, Vidal-Taboada JM, Vihinen M, Wait R, Wang X, Wiemann S, Wu B, Xu T, Yates JR, Zhong J, Zhou M, Zhu Y, Zurbig P, Pandey A. Human Proteinpedia enables sharing of human protein data. Nat Biotechnol. 2008 Feb; 26(2):164-7.
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Landan G, Graur D. Local reliability measures from sets of co-optimal multiple sequence alignments. Pac Symp Biocomput. 2008; 15-24.
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